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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACOT2, acyl-CoA thioesterase 2
Sequence ID:NM_006821
NR_046028
Entrez Gene ID:10965
Ensembl ID:ENSG00000119673

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 74035762 - 74042357

NM_006821 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18167403577174036586
81710197404009174040293
102017657404161174042356

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4303771Full LengthBC006335acyl-CoA thioesterase 2
2819682IncompleteBC004436acyl-CoA thioesterase 2
2819682IncompleteBC006500acyl-CoA thioesterase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006812  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006821 NP_006812 P49753 EC 3.1.2.2 Bile_Hydr_Trans

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L40401 AAC42007 P49753 EC 3.1.2.2
AY005822 AAF97985 P49753 EC 3.1.2.2
BC004436 AAH04436 P49753 EC 3.1.2.2
BC006335 AAH06335 P49753 EC 3.1.2.2
BC006500 AAH06500 P49753 EC 3.1.2.2
DQ082755 AAZ31237 P49753 EC 3.1.2.2
DQ893488 ABM84414    
DQ896406 ABM87405    
AK001939 BAA91989 P49753 EC 3.1.2.2
AK223635 BAD97355 P49753 EC 3.1.2.2
AK093131 BAG52662 B3KSA0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACOT2 NP_006812 M.musculus Acot2 171210 Gene Info NP_598949 76
R.norvegicus Acot2 192272   NP_620262 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)