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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DYNLT3, dynein, light chain, Tctex-type 3
Sequence ID:NM_006520
RefSeqGene ID:NG_016797
Entrez Gene ID:6990
Ensembl ID:ENSG00000165169

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 37699827 - 37706824

NM_006520 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1618303769808937699903
183119083770028037700357
190920323770103437701157
203320743770556937705610
207522303770673337706888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3448623Full LengthBC000968dynein, light chain, Tctex-type 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006511  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006520 NP_006511 P51808
Q6ICS3
Tctex-1

Related Sequences

 
mRNAGenPeptSwissProt
U02556 AAA57444 P51808
Q6ICS3
BC000968 AAH00968 P51808
Q6ICS3
GQ129368 ACT64502  
GQ129369 ACT64503  
AK311851 BAG34793 Q6ICS3
CR450320 CAG29316 P51808
Q6ICS3
CR542213 CAG47009 P51808
Q6ICS3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DYNLT3 NP_006511 M.musculus Dynlt3 67117 Gene Info NP_080251 91
R.norvegicus Dynlt3 363448   NP_001013246 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)