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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PFDN6, prefoldin subunit 6
Sequence ID:NM_001185181
NM_001265595
NM_001265596
NM_014260
Entrez Gene ID:10471
Ensembl ID:ENSG00000204220

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 33257377 - 33258622

 Exon Info From UCSC:
NM_001185181
NM_014260

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5415221Full LengthBC059783prefoldin subunit 6
5748799Full LengthBC039033prefoldin subunit 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055075  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001185181 NP_001172110    
NM_001265595 NP_001252524    
NM_001265596 NP_001252525    
NM_014260 NP_055075 O15212
Q5STK2
KE2

Related Sequences

 
mRNAGenPeptSwissProt
BC039033 AAH39033 O15212
Q5STK2
BC059783 AAH59783 O15212
Q5STK2
AK312150 BAG35084 Q5STK2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PFDN6 NP_055075 M.musculus H2-Ke2 14976 Gene Info NP_001172111 100
R.norvegicus Pfdn6 309629   NP_001158190 99
D.melanogaster CG7770 40176   NP_649159 48
A.thaliana PFD6 839878   NP_174292 45
C.elegans pfd-6 172474   NP_492058 42
A.gambiae AgaP_AGAP012235 1280452   XP_320305 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)