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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DYNLT1, dynein, light chain, Tctex-type 1
Sequence ID:NM_006519
Entrez Gene ID:6993
Ensembl ID:ENSG00000146425

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q25.2-q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 159057506 - 159063820

NM_006519 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19439159057508159057928
440517159058159159058236
518641159058802159058925
642683159062350159062391
684774159065713159065803

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4074224Full LengthBC029412dynein, light chain, Tctex-type 1
6723966Full LengthBC105588dynein, light chain, Tctex-type 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006510  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006519 NP_006510 P63172 Tctex-1

Related Sequences

 
mRNAGenPeptSwissProt
U56255 AAB03318 P63172
BC029412 AAH29412 P63172
BC105588 AAI05589 P63172
DQ892606 ABM83532  
DQ892607 ABM83533  
DQ895846 ABM86772  
DQ895847 ABM86773  
EU862237 ACF74976 P63172
D50663 BAA09317 P63172
AK315601 BAG37971 P63172
CR456931 CAG33212 P63172

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DYNLT1 NP_006510 R.norvegicus Dynlt1 83462   NP_112608 98
M.musculus Dynlt1d 100040603   XP_001475667 94
M.musculus Dynlt1e 100040631 Gene Info XP_001475796 94
M.musculus Dynlt1a 100310872 Gene Info NP_001160101 94
M.musculus Dynlt1c 100040563 Gene Info NP_001160102 94
M.musculus Dynlt1b 21648 Gene Info NP_033368 94
M.musculus Dynlt1f 100040531 Gene Info NP_001160099 94
A.gambiae AgaP_AGAP001229 1281942   XP_321929 78
D.melanogaster Dlc90F 42199   NP_477356 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)