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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. OSTC, oligosaccharyltransferase complex subunit
Sequence ID:NM_001267817
NM_001267818
NM_021227
Entrez Gene ID:58505
Ensembl ID:ENSG00000198856

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 109571780 - 109588972

Transcript StartTranscript EndChromosomal Start Chromosomal End
1210109571740109571949
211304109576719109576812
305502109578605109578802
5031080109588402109588979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4075646Full LengthBC016321oligosaccharyltransferase complex subunit
4093030Full LengthBC054857oligosaccharyltransferase complex subunit

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001267817 NP_001254746    
NM_001267818 NP_001254747    
NM_021227 NP_067050 Q9NRP0  

Related Sequences

 
mRNAGenPeptSwissProt
AF161425 AAF28985 Q9NRP0
AF068297 AAF65186 Q9NRP0
AF201937 AAF86873 Q9NRP0
BC016321 AAH16321 Q9NRP0
BC054857 AAH54857 Q9NRP0
AF343342 AAK69656 Q9NRP0
DQ893222 ABM84148  
DQ896551 ABM87550  
AK312185 BAG35118 Q9NRP0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OSTC NP_067050 M.musculus Ostc 66357 Gene Info NP_079785 99
R.norvegicus Ostc 362040   NP_001102036 99
A.gambiae AgaP_AGAP008475 1277503   XP_316970 71
D.melanogaster CG9662 33554   NP_608772 63
A.thaliana AT2G19340 816451   NP_849987 47
A.thaliana AT4G29870 829109   NP_194716 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)