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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTPN9, Protein tyrosine phosphatase, non-receptor type 9
Sequence ID:NM_002833
Entrez Gene ID:5780
Ensembl ID:ENSG00000169410

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 75761708 - 75767662

 Exon Info From UCSC:
NM_002833

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3895727Full LengthBC010863protein tyrosine phosphatase, non-receptor type 9
5276190Full LengthBC071574protein tyrosine phosphatase, non-receptor type 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002824  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002833 NP_002824 P43378 EC 3.1.3.48 Y_phosphatase
CRAL_TRIO
CRAL_TRIO_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M83738 AAA60226 P43378 EC 3.1.3.48
BC010863 AAH10863 P43378 EC 3.1.3.48
BC071574 AAH71574 Q6IQ43  
BT007405 AAP36073 P43378 EC 3.1.3.48
DQ890986 ABM81912    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPN9 NP_002824 M.musculus Ptpn9 56294 Gene Info NP_062625 97
R.norvegicus Ptpn9 266611   NP_001013058 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)