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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SOBP, sine oculis binding protein homolog (Drosophila)
Sequence ID:NM_018013
RefSeqGene ID:NG_028200
Entrez Gene ID:55084
Ensembl ID:ENSG00000112320

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 107955257 - 107980671

NM_018013 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1600107811316107811915
601739107824860107824998
740925107827445107827630
9261077107854662107854813
10781173107908283107908378
11743129107954717107956672
31306227107979410107982507

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40030510IncompleteBC109391hypothetical protein FLJ10159
40030511IncompleteBC113966sine oculis binding protein homolog (Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018013 NP_060483 A7XYQ1  

Related Sequences

 
mRNAGenPeptSwissProt
BC091526 AAH91526 A7XYQ1
BC113966 AAI13967 Q24K27
DQ507800 ABF72848 A7XYQ1
AK090879 BAC03537 A7XYQ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOBP NP_060483 M.musculus Sobp 109205 Gene Info NP_780616 95
R.norvegicus Sobp 309860   NP_001098110 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)