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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DNAJA1, DnaJ (Hsp40) homolog, subfamily A, member 1
Sequence ID:NM_001539
Entrez Gene ID:3301
Ensembl ID:ENSG00000086061

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 33026883 - 33039064

NM_001539 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11733302520833025380
1743153302647233026613
3164933302681033026987
4945983302988233029986
5998263303043733030664
8279413303421333034327
94210573303657133036686
105811583303701233037112
115915383303868233039061

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2900892Full LengthBC008182DnaJ (Hsp40) homolog, subfamily A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001530  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001539 NP_001530 Q5T7Q0
P31689
DnaJ
DnaJ_CXXCXGXG
DnaJ_C

Related Sequences

 
mRNAGenPeptSwissProt
L08069 AAC37517 Q5T7Q0
P31689
BC008182 AAH08182 Q5T7Q0
P31689
AY186741 AAO31694 Q86TL9
BT007292 AAP35956 Q5T7Q0
P31689
DQ891091 ABM82017  
EU176556 ABW03357  
D13388 BAA02656 P31689
AK289623 BAF82312 Q5T7Q0
AK298725 BAH12856 B7Z5C0
AJ277242 CAB93148 Q9NXZ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DNAJA1 NP_001530 M.musculus Dnaja1 15502 Gene Info NP_032324 99
R.norvegicus Dnaja1 65028   NP_075223 99
C.elegans dnj-12 173341   NP_493570 53
A.thaliana ATJ3 823531   NP_189997 52
A.thaliana J2 832267   NP_568412 51
P.falciparum PF14_0359 811941   XP_001348533 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)