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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACADM, acyl-CoA dehydrogenase, C-4 to C-12 straight chain
Sequence ID:NM_000016
NM_001127328
NR_022013
RefSeqGene ID:NG_007045
Entrez Gene ID:34
Ensembl ID:ENSG00000117054

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 76190464 - 76228494

 Exon Info From UCSC:
NM_000016
NM_001127328

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3934299Full LengthBC005377acyl-Coenzyme A dehydrogenase, C-4 to C-12 straight chain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000007  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000016 NP_000007 P11310 EC 1.3.8.7 Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_N
NM_001127328 NP_001120800      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M16827 AAA51566 P11310 EC 1.3.8.7
AF251043 AAF63626 P11310 EC 1.3.8.7
BC005377 AAH05377 P11310 EC 1.3.8.7
DQ892341 ABM83267    
DQ895710 ABM86636    
AK312629 BAG35514 P11310 EC 1.3.8.7
AK296045 BAG58809 B4DJE7  
AK301005 BAG62623 B4DVB1  
AK301039 BAG62652 B4DVE0  
AK301717 BAG63188 B4DWX6  
AK315946 BAH14317 B7Z9I1  
BX647734 CAI45986 Q5HYG7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACADM NP_001120800 M.musculus Acadm 11364 Gene Info NP_031408 88
R.norvegicus Acadm 24158   NP_058682 87
A.gambiae AgaP_AGAP005662 1276346   XP_315683 71
D.melanogaster CG12262 38864   NP_648149 70
C.elegans acdh-10 181757   NP_510788 64
C.elegans acdh-7 181758   NP_510789 63
C.elegans acdh-8 173979   NP_495142 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)