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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. COL19A1, collagen, type XIX, alpha 1
Sequence ID:NM_001858
Entrez Gene ID:1310
Ensembl ID:ENSG00000082293

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 70577307 - 70590100

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322414Full LengthBC113362collagen, type XIX, alpha 1
8322416Full LengthBC113364collagen, type XIX, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001849  

Protein Infomation

NM_001858 NP_001849 Q14993 Collagen

Related Sequences

U09279 AAA21146 Q14993
L12347 AAA36358 Q14993
M63597 AAA58468 Q14993
BC113362 AAI13363 Q14993
BC113364 AAI13365 Q14993
D38163 BAA07368 Q14993

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens COL19A1 NP_001849 M.musculus Col19a1 12823 Gene Info NP_031759 84
R.norvegicus Col19a1 367236   XP_002730058 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)