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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ACOT8, Acyl-CoA thioesterase 8
Sequence ID:NM_005469
Entrez Gene ID:10005
Ensembl ID:ENSG00000101473

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 44470360 - 44485984

NM_005469 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12354447036044470594
2364304447216544472359
4315884447290144473058
5898144447708844477313
8159484448379744483930
94911574448582644486034

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40125706Full LengthBC117155acyl-CoA thioesterase 8
40125708Full LengthBC117157acyl-CoA thioesterase 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005460  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005469 NP_005460 O14734 EC 3.1.2.27 Acyl_CoA_thio

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF014404 AAB71665 O14734 EC 3.1.2.27
AF124264 AAD27616 O14734 EC 3.1.2.27
BC117155 AAI17156 O14734 EC 3.1.2.27
BC117157 AAI17158 O14734 EC 3.1.2.27
HQ258192 ADR82946    
AK292494 BAF85183 A8K8X9  
AK056668 BAG51780 A8K8X9  
AK296973 BAG59516 B4DLF4  
AK298783 BAG60922 B4DQG0  
X86032 CAA60024 O14734 EC 3.1.2.27
CR541771 CAG46570 Q6FHI2  
CR541778 CAG46577 Q6FHI2  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ACOT8 NP_005460 R.norvegicus Acot8 170588   NP_570112 86
M.musculus Acot8 170789 Gene Info NP_573503 85
C.elegans F25E2.3 180429   NP_508159 43
N.crassa NCU00580 3881949   XP_965720 42
C.elegans C37H5.13 178878   NP_504301 40
C.elegans C17C3.1 173942   NP_001040743 39
C.elegans C17C3.3 182714   NP_495072 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)