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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL36AL, ribosomal protein L36a-like
Sequence ID:NM_001001
RefSeqGene ID:NG_008920
Entrez Gene ID:6166
Ensembl ID:ENSG00000165502

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 50085408 - 50087349

NM_001001 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
284795008540650085857
4805495008727950087348

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2957923Full LengthBC003145ribosomal protein L36a-like
3507009Full LengthBC000741ribosomal protein L36a-like
4271403Full LengthBC070207ribosomal protein L36a-like
6727975Full LengthBC107716ribosomal protein L36a-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000992  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001001 NP_000992 Q969Q0 Ribosomal_L44

Related Sequences

 
mRNAGenPeptSwissProt
M15661 AAA36589 Q969Q0
BC000741 AAH00741 Q969Q0
BC003145 AAH03145 Q969Q0
BC070207 AAH70207 Q969Q0
BC107716 AAI07717 Q969Q0
HQ448719 ADQ33197  
AB063609 BAC19836 Q969Q0
AK311959 BAG34899 B2R4V2
CR542166 CAG46963 Q969Q0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL36AL NP_000992 R.norvegicus RGD1563431 501876   XP_002728097 95
M.musculus Gm13194 381346 Gene Info XP_355309 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)