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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PALB2, partner and localizer of BRCA2
Sequence ID:NM_024675
RefSeqGene ID:NG_007406
Entrez Gene ID:79728
Ensembl ID:ENSG00000083093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BREAST CANCERAKT1
ATM
BARD1
BRCA1
BRCA2
BRIP1
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RAD54L
RB1CC1
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 23614480 - 23646443

 Exon Info From UCSC:
NM_024675

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6045564Full LengthBC044254partner and localizer of BRCA2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024675 NP_078951 Q86YC2  

Related Sequences

 
mRNAGenPeptSwissProt
BC044254 AAH44254 Q86YC2
EU831697 ACE86531  
EU831610 ACE87210  
AK025469 BAB15140 Q86YC2
AK097533 BAC05090 Q86YC2
AK299152 BAG61201 B4DR89
AL834425 CAD39086 Q86YC2
CR749637 CAH18431 Q86YC2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PALB2 NP_078951 M.musculus Palb2 233826 Gene Info NP_001074707 64
R.norvegicus Palb2 293452   XP_215047 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)