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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. AFF3, AF4/FMR2 family, member 3
Sequence ID:NM_001025108
Entrez Gene ID:3899
Ensembl ID:ENSG00000144218

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q11.2-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 100167582 - 100210060

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020569Full LengthBC136579AF4/FMR2 family, member 3
9052786Full LengthBC144266AF4/FMR2 family, member 3
5498133IncompleteBC036895AF4/FMR2 family, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002276  NP_001020279  

Protein Infomation

NM_001025108 NP_001020279   AF-4
NM_002285 NP_002276   AF-4

Related Sequences

U34360 AAA98763 P51826
BC036895 AAH36895 P51826
BC136579 AAI36580 P51826
BC144266 AAI44267 P51826
AK092327 BAC03864 Q8NAP7
AB209634 BAD92871 P51826
AK290468 BAF83157 A8K353
AK297407 BAH12572 B7Z4I6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens AFF3 NP_001020279 M.musculus Aff3 16764 Gene Info NP_034808 89
R.norvegicus Aff3 363220   XP_343560 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)