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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLC6A1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1
Sequence ID:NM_003042
Entrez Gene ID:6529
Ensembl ID:ENSG00000157103

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 11078940 - 11080931

 Exon Info From UCSC:
NM_003042

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5264672Full LengthBC033904solute carrier family 6 (neurotransmitter transporter, GABA), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003033  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003042 NP_003033 P30531 SNF

Related Sequences

 
mRNAGenPeptSwissProt
BC033904 AAH33904 P30531
DQ891222 ABM82148  
DQ894405 ABM85331  
AK295702 BAH12161 B7Z3C5
X54673 CAA38484 P30531

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC6A1 NP_003033 M.musculus Slc6a1 232333 Gene Info NP_848818 98
R.norvegicus Slc6a1 79212   NP_077347 98
A.gambiae AgaP_AGAP009768 1279174   XP_318854 63
D.melanogaster CG1732 43805   NP_651930 59
C.elegans snf-11 191770   NP_505873 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)