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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SH3RF2, SH3 domain containing ring finger 2
Sequence ID:NM_152550
Entrez Gene ID:153769
Ensembl ID:ENSG00000156463

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 145429648 - 145442344

NM_152550 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1132145316125145316256
133616145317385145317868
617886145379620145379889
887982145383620145383715
9831297145393309145393623
12981389145427334145427425
13901560145428637145428807
15611793145435543145435775
17942152145439428145439786
21533041145441988145442876

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40118357Full LengthBC125106SH3 domain containing ring finger 2
40118360Full LengthBC125107SH3 domain containing ring finger 2
5169239IncompleteBC031650SH3 domain containing ring finger 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689763  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152550 NP_689763   SH3_1
zf-C3HC4
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
BC031650 AAH31650 Q8TEC5
BC073914 AAH73914 Q8TEC5
BC125106 AAI25107 Q8TEC5
BC125107 AAI25108 Q08AM8
AK058046 BAB71639 Q8TEC5
AK074234 BAB85025 Q8TEC5
AK292576 BAF85265 Q8TEC5
AK302024 BAG63422 B4DXL0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SH3RF2 NP_689763 R.norvegicus Sh3rf2 307472   NP_001029359 82
M.musculus Sh3rf2 269016 Gene Info NP_001139771 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)