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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GRPEL1, GrpE-like 1, mitochondrial (E. coli)
Sequence ID:NM_025196
Entrez Gene ID:80273
Ensembl ID:ENSG00000109519

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 7060621 - 7062547

NM_025196 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16117170617797062934
1172125370641117064192
1254141670657877065949
1417151970696977069799

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4823476Full LengthBC024242GrpE-like 1, mitochondrial (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079472  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025196 NP_079472 Q9HAV7 GrpE

Related Sequences

 
mRNAGenPeptSwissProt
AF298592 AAG31605 Q9HAV7
BC024242 AAH24242 Q9HAV7
AF087896 AAP97195 Q9HAV7
DQ891523 ABM82449  
DQ894713 ABM85639  
AK312882 BAG35730 Q9HAV7
AK301695 BAG63167 B4DWV5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GRPEL1 NP_079472 R.norvegicus Grpel1 79563   NP_077813 88
M.musculus Grpel1 17713 Gene Info NP_077798 88
A.gambiae AgaP_AGAP011150 1270777   XP_309497 56
A.gambiae AgaP_AGAP012770 1268932   XP_307508 55
D.melanogaster Roe1 36508   NP_610886 49
N.crassa NCU01516 3873128   XP_956965 44
C.elegans C34C12.8 175449   NP_497713 43
A.thaliana AT5G55200 835613   NP_200331 43
S.pombe mge1 2541039   NP_596677 40
A.thaliana AR192 828785   NP_567757 40
P.falciparum PF11_0258 810805   XP_001347929 40
S.cerevisiae MGE1 854407   NP_014875 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)