Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYNJ2BP, synaptojanin 2 binding protein
Sequence ID:NM_018373
Entrez Gene ID:55333
Ensembl ID:ENSG00000213463

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 70838873 - 70883762

NM_018373 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1766507083321470839847
665167467084239270842487
674768837085518670855322
688470747088361670883806

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3952366Full LengthBC007704synaptojanin 2 binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060843  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001202547 NP_001189476    
NM_001202548 NP_001189477    
NM_001202549 NP_001189478    
NM_018373 NP_060843 P57105 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC007704 AAH07704 P57105
AY534623 AAT01566 P57105
AK002133 BAA92098 P57105

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYNJ2BP NP_060843 M.musculus Synj2bp 24071 Gene Info NP_079568 91
R.norvegicus Synj2bp 64531   NP_072121 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)