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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SLCO5A1, Solute carrier organic anion transporter family, member 5A1
Sequence ID:NM_030958
NM_001146008
NM_001146009
Entrez Gene ID:81796
Ensembl ID:ENSG00000137571

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 70584575 - 70747208

 Exon Info From UCSC:
NM_030958
NM_001146008
NM_001146009

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021422Full LengthBC137424solute carrier organic anion transporter family, member 5A1
40118841Full LengthBC139755solute carrier organic anion transporter family, member 5A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112220  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146008 NP_001139480    
NM_001146009 NP_001139481    
NM_030958 NP_112220 Q9H2Y9 OATP
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
AF205075 AAG42207 Q9H2Y9
BC016067 AAH16067 Q6PJF4
BC137424 AAI37425 Q9H2Y9
BC139755 AAI39756 A4QPC2
AK022760 BAG51109 B3KMU7
AK096879 BAG53389 B3KUC7
AK299048 BAG61121 B4DR09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLCO5A1 NP_112220 M.musculus Slco5a1 240726 Gene Info NP_766429 90
R.norvegicus Slco5a1 312907   NP_001101368 90
D.melanogaster Oatp30B 34268   NP_609293 42
A.gambiae AgaP_AGAP008711 3291790   XP_557860 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)