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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HEPACAM2, HEPACAM family member 2
Sequence ID:NM_198151
NM_001039372
Entrez Gene ID:253012
Ensembl ID:ENSG00000188175

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 92817899 - 92855782

 Exon Info From UCSC:
NM_198151
NM_001039372

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020287Full LengthBC136300HEPACAM family member 2
9020288Full LengthBC136301HEPACAM family member 2
40147445Full LengthBC139906HEPACAM family member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_937794  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039372 NP_001034461 A8MVW5  
NM_198151 NP_937794   ig
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC136300 AAI36301 A8MVW5
BC136301 AAI36302 A8MVW5
BC139906 AAI39907 A8MVW5
AY358345 AAQ88711 A8MVW5
AK096002 BAG53196 A8MVW5
AK298361 BAG60603 A8MVW5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HEPACAM2 NP_001034461 M.musculus Hepacam2 101202 Gene Info NP_849230 85
R.norvegicus Hepacam2 296846   NP_001100050 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)