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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ALG13, asparagine-linked glycosylation 13 homolog (S. cerevisiae)
Sequence ID:NM_001039210
NM_001099922
NM_001168385
NM_001257230
NM_001257231
NM_001257234
NM_001257235
NM_001257237
NM_001257239
NM_001257240
NM_001257241
NM_018466
NR_033125
RefSeqGene ID:NG_016238
Entrez Gene ID:79868
Ensembl ID:ENSG00000101901

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 110924416 - 110931356

 Exon Info From UCSC:
NM_001039210
NM_001099922
NM_001168385
NM_018466

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3996922Full LengthBC005336asparagine-linked glycosylation 13 homolog (S. cerevisiae)
40125928Full LengthBC117377asparagine-linked glycosylation 13 homolog (S. cerevisiae)
40125930Full LengthBC117379asparagine-linked glycosylation 13 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060936  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001039210 NP_001034299      
NM_001099922 NP_001093392 Q9NP73 EC 2.4.1.141  
NM_001168385 NP_001161857      
NM_001257230 NP_001244159      
NM_001257231 NP_001244160      
NM_001257234 NP_001244163      
NM_001257235 NP_001244164      
NM_001257237 NP_001244166      
NM_001257239 NP_001244168      
NM_001257240 NP_001244169      
NM_001257241 NP_001244170      
NM_018466 NP_060936 Q9NP73 EC 2.4.1.141 Glyco_tran_28_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF220051 AAF67644 Q9NP73 EC 2.4.1.141
BC005336 AAH05336 Q9NP73 EC 2.4.1.141
BC117377 AAI17378 Q9NP73 EC 2.4.1.141
BC117379 AAI17380 Q9NP73 EC 2.4.1.141
AK026671 BAB15521 Q9NP73 EC 2.4.1.141
AK223154 BAD96874 Q9NP73 EC 2.4.1.141
AK312229 BAG35162 Q9NP73 EC 2.4.1.141
AK300394 BAH13276 Q9NP73 EC 2.4.1.141
AK302729 BAH13790 Q9NP73 EC 2.4.1.141
AK302890 BAH13833 Q9NP73 EC 2.4.1.141
AK304712 BAH14244 Q9NP73 EC 2.4.1.141
AK316306 BAH14677 Q9NP73 EC 2.4.1.141
AK316522 BAH14893 Q9NP73 EC 2.4.1.141

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ALG13 NP_001093392 R.norvegicus RGD1560493 315365   XP_235727 70
M.musculus Alg13 100503426   XP_003085353 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)