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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXC10, homeobox C10
Sequence ID:NM_017409
Entrez Gene ID:3226
Ensembl ID:ENSG00000180818

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 54379043 - 54384055

NM_017409 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18495437894554379793
85019575438295254384059

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3458115Full LengthBC001293homeobox C10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059105  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017409 NP_059105 Q9NYD6
Q53XI4
Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
AF255675 AAF67759 Q9NYD6
BC001293 AAH01293 Q9NYD6
Q53XI4
BT009921 AAP88923 Q9NYD6
Q53XI4
JF432674 ADZ15891  
AK313759 BAG36498 Q53XI4
X99684 CAA67999 Q9NYD6
X99685 CAA68000 Q9NYD6

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)