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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TERF1, telomeric repeat binding factor (NIMA-interacting) 1
Sequence ID:NM_003218
NM_017489
RefSeqGene ID:NG_029121
Entrez Gene ID:7013
Ensembl ID:ENSG00000147601

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 73921108 - 73959727

 Exon Info From UCSC:
NM_003218
NM_017489

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4724068Full LengthBC029378telomeric repeat binding factor (NIMA-interacting) 1
4636019IncompleteBC071975telomeric repeat binding factor (NIMA-interacting) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003209  NP_059523  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003218 NP_003209   Myb_DNA-binding
TRF
NM_017489 NP_059523 P54274 Myb_DNA-binding
TRF

Related Sequences

 
mRNAGenPeptSwissProt
U74382 AAB53363 P54274
U40705 AAB54036 P54274
AF003001 AAB81137 P54274
BC029378 AAH29378 P54274
AY576778 AAT81150 Q5QGN5
DQ892573 ABM83499  
DQ895789 ABM86715  
AK292529 BAF85218 A8K914
X93511 CAA63768 P54274

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TERF1 NP_059523 R.norvegicus Terf1 297758   NP_001012482 68
M.musculus Terf1 21749 Gene Info NP_033378 68

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta