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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MRPL38, mitochondrial ribosomal protein L38
Sequence ID:NM_032478
Entrez Gene ID:64978
Ensembl ID:ENSG00000204316

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 73894723 - 73897329

NM_032478 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
403837389472373895066
3845207389523873895374
5216797389559673895754
6807257389706273897107
7267987389728173897353
79910077389779273898000
100811427389810073898234
114313227390062073900799
132316147390088973901180

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3546083Full LengthBC013311mitochondrial ribosomal protein L38
5298180IncompleteBC041881mitochondrial ribosomal protein L38

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115867  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032478 NP_115867 Q96DV4 PBP

Related Sequences

 
mRNAGenPeptSwissProt
AF161380 AAF28940 Q96DV4
BC013311 AAH13311 Q96DV4
HQ447208 ADQ31695  
AK313283 BAG36091 B2R894

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL38 NP_115867 M.musculus Mrpl38 60441 Gene Info NP_077139 87
R.norvegicus Mrpl38 303685   NP_001009369 86
A.gambiae AgaP_AGAP000652 1272436   XP_311178 46
D.melanogaster mRpL38 32375   NP_511152 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)