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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDO1, cysteine dioxygenase, type I
Sequence ID:NM_001801
Entrez Gene ID:1036
Ensembl ID:ENSG00000129596

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 115140431 - 115152354

NM_001801 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16743115140431115141158
744913115142045115142214
9141068115146857115147011
10691146115148877115148954
11471627115151924115152404

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4797463Full LengthBC024241cysteine dioxygenase, type I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001792  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001801 NP_001792 Q16878 EC 1.13.11.20 CDO_I

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024241 AAH24241 Q16878 EC 1.13.11.20
DQ891652 ABM82578    
HQ448366 ADQ32846    
D85777 BAA12872 Q16878 EC 1.13.11.20
AK314231 BAG36901 Q16878 EC 1.13.11.20
Z23010 CAA80552 Q16878 EC 1.13.11.20
Z31357 CAA83234 Q16878 EC 1.13.11.20
CR536540 CAG38777 Q16878 EC 1.13.11.20

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDO1 NP_001792 R.norvegicus Cdo1 81718   NP_434696 92
M.musculus Cdo1 12583 Gene Info NP_149026 92
A.gambiae AgaP_AGAP005153 1274834   XP_314041 60
D.melanogaster CG5493 37139   NP_611348 57
N.crassa NCU06625 3878515   XP_962367 51
C.elegans F56F10.3 180434   NP_508168 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)