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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ABCC6, ATP-binding cassette, sub-family C (CFTR/MRP), member 6
Sequence ID:NM_001079528
NM_001171
RefSeqGene ID:NG_007558
Entrez Gene ID:368
Ensembl ID:ENSG00000091262

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
ARTERIAL CALCIFICATION, GENERALIZED, OF INFANCY, 2 
PSEUDOXANTHOMA ELASTICUMXYLT1
XYLT1
XYLT2
PSEUDOXANTHOMA ELASTICUM,FORME FRUSTE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 16243989 - 16317314

 Exon Info From UCSC:
NM_001079528
NM_001171

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40124570Full LengthBC131732ATP-binding cassette, sub-family C (CFTR/MRP), member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001162  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079528 NP_001072996    
NM_001171 NP_001162 O95255 ABC_tran
ABC_membrane

Related Sequences

 
mRNAGenPeptSwissProt
AF076622 AAC79696 O95255
AF168791 AAD51293 O95255
BC050733 AAH50733 Q8TCY8
BC131732 AAI31733 A2RRN8
AY078405 AAL83711 Q8TCY8
AK298295 BAG60553 B4DPE1
AM711638 CAN84639 A8KIG6
AM774324 CAO81806 A8Y988

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ABCC6 NP_001162 M.musculus Abcc6 27421 Gene Info NP_061265 80
R.norvegicus Abcc6 81642   NP_112275 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)