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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. XAF1, XIAP associated factor 1
Sequence ID:NM_017523
NM_199139
NR_046396
NR_046397
NR_046398
Entrez Gene ID:54739
Ensembl ID:ENSG00000132530

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6676986 - 6678962

 Exon Info From UCSC:
NM_017523
NM_199139

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6068243Full LengthBC073156XIAP associated factor 1
4707214IncompleteBC032776XIAP associated factor 1
6655151IncompleteBC058017XIAP associated factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059993  NP_954590  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017523 NP_059993 Q6GPH4 zf-TRAF
NM_199139 NP_954590   zf-TRAF

Related Sequences

 
mRNAGenPeptSwissProt
BC032776 AAH32776 Q6GPH4
BC073156 AAH73156 Q6GPH4
EF028165 ABM74556 Q6GPH4
EF028166 ABM74557 Q6GPH4
AK290276 BAF82965 Q6GPH4
AK292710 BAF85399 Q6GPH4
AK292848 BAF85537 Q6GPH4
AK056908 BAG51823 B3KPW1
X99699 CAA68030 Q6GPH4
BX649188 CAE46206 Q6GPH4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens XAF1 NP_059993 R.norvegicus XAF1 679600   XP_001053682 54
M.musculus Xaf1 327959 Gene Info NP_001032802 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)