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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. JPH2, junctophilin 2
Sequence ID:NM_020433
NM_175913
RefSeqGene ID:NG_031867
Entrez Gene ID:57158
Ensembl ID:ENSG00000149596

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 42740335 - 42742643

 Exon Info From UCSC:
NM_020433
NM_175913

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5295024IncompleteBC043206junctophilin 2
100069601BC172751junctophilin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_787109  NP_065166  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_020433 NP_065166 Q9BR39 MORN
NM_175913 NP_787109   MORN

Related Sequences

 
mRNAGenPeptSwissProt
BC043206 AAH43206 Q86VZ3
BC172751 AAI72751  
AK304863 BAG65601 B4E3T9
AL132999 CAB61347 Q9BR39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens JPH2 NP_065166 R.norvegicus Jph2 296345   NP_001033063 90
M.musculus Jph2 59091 Gene Info NP_067541 89
A.gambiae AgaP_AGAP002159 3290568   XP_565673 53
C.elegans jph-1 266843   NP_492193 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)