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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VAX1, ventral anterior homeobox 1
Sequence ID:NM_001112704
NM_199131
RefSeqGene ID:NG_012317
Entrez Gene ID:11023
Ensembl ID:ENSG00000148704

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 118888031 - 118897812

 Exon Info From UCSC:
NM_001112704
NM_199131

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069200Full LengthBC101694ventral anterior homeobox 1
8069202Full LengthBC101696ventral anterior homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_954582  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001112704 NP_001106175 Q5SQQ9  
NM_199131 NP_954582   Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC101694 AAI01695 Q5SQQ9
BC101696 AAI01697 Q5SQQ9
EU446939 ABZ92468  
AK127095 BAC86826 Q5SQQ9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VAX1 NP_001106175 M.musculus Vax1 22326 Gene Info NP_033527 97
R.norvegicus Vax1 64571   NP_072158 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)