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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TP53BP1, Tumor protein p53 binding protein 1
Sequence ID:NM_005657
NM_001141980
NM_001141979
Entrez Gene ID:7158
Ensembl ID:ENSG00000067369

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q15-q21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 43699413 - 43785325

 Exon Info From UCSC:
NM_005657
NM_001141980
NM_001141979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8327629Full LengthBC112161tumor protein p53 binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005648  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001141979 NP_001135451    
NM_001141980 NP_001135452    
NM_005657 NP_005648 Q12888 BRCT

Related Sequences

 
mRNAGenPeptSwissProt
U09477 AAA21596 Q12888
AF078776 AAC62018 Q12888
BC017846 AAH17846 Q05D73
BC112161 AAI12162 Q12888
AB210025 BAE06107 Q12888
AK292915 BAF85604 A8KA50
AK123418 BAG53901 B3KVT9
AK295764 BAH12183 B7Z3E7
BX537418 CAD97660 Q12888

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TP53BP1 NP_001135452 R.norvegicus Tp53bp1 296099   NP_001099971 89
M.musculus Trp53bp1 27223 Gene Info NP_038763 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)