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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PSMD7, proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
Sequence ID:NM_002811
Entrez Gene ID:5713
Ensembl ID:ENSG00000103035

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 74330714 - 74339631

NM_002811 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12067433068074330885
2072987433401274334103
2993917433494974335041
3924897433545274335549
4905707433610974336189
5716627433820074338291
66316607433918674340183

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4334058Full LengthBC012606proteasome (prosome, macropain) 26S subunit, non-ATPase, 7
2822691IncompleteBC000338proteasome (prosome, macropain) 26S subunit, non-ATPase, 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002802  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002811 NP_002802 P51665 Mov34

Related Sequences

 
mRNAGenPeptSwissProt
BC000338 AAH00338 P51665
BC012606 AAH12606 P51665
HQ447863 ADQ32347  
D50063 BAA08780 P51665
AK315381 BAG37774 B2RD27
AK301996 BAG63400 B4DXI8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PSMD7 NP_002802 M.musculus Psmd7 17463 Gene Info NP_034947 98
R.norvegicus Psmd7 307821   NP_001100896 98
A.gambiae AgaP_AGAP012135 1280542   XP_320392 77
D.melanogaster Mov34 37894   NP_523845 77
C.elegans rpn-8 172009   NP_491319 69
A.thaliana RPN8A 830463   NP_196197 63
A.thaliana MEE34 820298   NP_187736 61
N.crassa NCU01547 3872410   XP_956250 61
S.pombe rpn8 2538912   NP_587803 55
S.cerevisiae RPN8 854435   NP_014904 50
P.falciparum PFI0630w 813406   XP_001352001 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)