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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. CLIC4, chloride intracellular channel 4
Sequence ID:NM_013943
Entrez Gene ID:25932
Ensembl ID:ENSG00000169504

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 25071903 - 25167525

NM_013943 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3861372Full LengthBC012444chloride intracellular channel 4

Protein Infomation

NM_013943 NP_039234 Q9Y696  

Related Sequences

AF109196 AAD26136 Q9Y696
AF097330 AAD38446 Q9Y696
BC012444 AAH12444 Q9Y696
AK001624 BAA91794 Q9NVF8
AK315051 BAG37528 Q6FIC5
AK095959 BAG53175 B3KTR3
AK301466 BAG62986 B4DWC4
AL117424 CAB55916 Q9Y696
CR533501 CAG38532 Q9Y696
AM393644 CAL38520  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens CLIC4 NP_039234 M.musculus Clic4 29876 Gene Info NP_038913 99
R.norvegicus Clic4 83718   NP_114006 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)