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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMX3, Thioredoxin-related transmembrane protein 3
Sequence ID:NM_019022
Entrez Gene ID:54495
Ensembl ID:ENSG00000166479

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 66340927 - 66382315

 Exon Info From UCSC:
NM_019022

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939637Full LengthBC093792thioredoxin-related transmembrane protein 3
7939639Full LengthBC093794thioredoxin-related transmembrane protein 3
3953778IncompleteBC018981thioredoxin domain containing 10
3954312IncompleteBC007690thioredoxin domain containing 10
4693508IncompleteBC107422thioredoxin-related transmembrane protein 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061895  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019022 NP_061895 Q96JJ7 EC 5.3.4.1 Thioredoxin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC032325 AAH32325 Q96JJ7 EC 5.3.4.1
BC093792 AAH93792 Q96JJ7 EC 5.3.4.1
BC093794 AAH93794 Q96JJ7 EC 5.3.4.1
BC107422 AAI07423 Q3B7X1  
AK000800 BAA91381 Q96JJ7 EC 5.3.4.1
AB058733 BAB47459 Q96JJ7 EC 5.3.4.1
AK122715 BAG53687 Q96JJ7 EC 5.3.4.1
AK295551 BAG58455 B4DIE3  
AM393206 CAL38084 Q96JJ7 EC 5.3.4.1
AM393295 CAL38173    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMX3 NP_061895 M.musculus Tmx3 67988 Gene Info NP_938037 92
C.elegans thioredoxin 172039   NP_491361 33
A.gambiae AgaP_AGAP005431 1276128   XP_315438 31
D.melanogaster CG5027 39775   NP_648847 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)