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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RETSAT, retinol saturase (all-trans-retinol 13,14-reductase)
Sequence ID:NM_017750
Entrez Gene ID:54884
Ensembl ID:ENSG00000042445

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 85569219 - 85577919

 Exon Info From UCSC:
NM_017750

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826703Full LengthBC068517retinol saturase (all-trans-retinol 13,14-reductase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060220  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017750 NP_060220 Q6NUM9 EC 1.3.99.23 FAD_binding_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC011418 AAH11418 Q6NUM9 EC 1.3.99.23
BC068517 AAH68517 Q6NUM9 EC 1.3.99.23
AY358568 AAQ88931 Q6NUM9 EC 1.3.99.23
EU831668 ACE86502    
EU831583 ACE87183    
AK000303 BAA91069 Q6NUM9 EC 1.3.99.23
AK075261 BAC11505 Q6NUM9 EC 1.3.99.23
AK296522 BAG59153 B4DKE1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RETSAT NP_060220 M.musculus Retsat 67442 Gene Info NP_080435 81
R.norvegicus Retsat 246298   NP_659552 81
A.thaliana AT1G57770 842152   NP_176088 29
N.crassa NCU00552 3880862   XP_964713 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)