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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TP53RK, TP53 regulating kinase
Sequence ID:NM_033550
Entrez Gene ID:112858
Ensembl ID:ENSG00000172315

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 45315286 - 45318269

NM_033550 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1328784531300445315869
287933844531777045318275

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3899629Full LengthBC009727TP53 regulating kinase
5277911Full LengthBC066309TP53 regulating kinase
3854842IncompleteBC010637TP53 regulating kinase

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_033550 NP_291028 Q96S44 EC 2.7.11.1  

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC009727 AAH09727 Q96S44 EC 2.7.11.1
BC010637 AAH10637 Q96S44 EC 2.7.11.1
BC066309 AAH66309 Q96S44 EC 2.7.11.1
AB017505 BAB61875 Q96S44 EC 2.7.11.1
AB065434 BAB62041 Q96S44 EC 2.7.11.1
AK315182 BAG37623 B2RCM6  
AK096502 BAG53306 Q96S44 EC 2.7.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TP53RK NP_291028 R.norvegicus Tp53rk 362272   NP_001102076 87
R.norvegicus LOC685619 685619   XP_002729296 86
A.thaliana AT5G26110 832680   NP_568482 49
D.melanogaster CG10673 38600   NP_647948 47
N.crassa NCU04595 3874010   XP_957863 47
S.pombe SPAP27G11.07c 2541953   NP_593411 46
A.gambiae AgaP_AGAP007476 1269747   XP_308396 44
S.cerevisiae BUD32 853178   NP_011778 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)