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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBN1, ubinuclein 1
Sequence ID:NM_001079514
NM_016936
Entrez Gene ID:29855
Ensembl ID:ENSG00000118900

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 4898136 - 4932363

 Exon Info From UCSC:
NM_001079514
NM_016936

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063359Full LengthBC157077ubinuclein 1
100062491BC156176ubinuclein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079514 NP_001072982    
NM_016936 NP_058632 Q9NPG3  

Related Sequences

 
mRNAGenPeptSwissProt
U19346 AAA64188 Q9NPG3
AF108460 AAF31755 Q9NPG3
AF108461 AAF31756 Q9NPG3
BC156176 AAI56177  
BC157077 AAI57078  
AK300131 BAH13219 Q9NPG3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBN1 NP_001072982 M.musculus Ubn1 170644 Gene Info NP_080942 87
R.norvegicus Ubn1 302935   NP_001100447 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)