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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MYO1B, myosin IB
Sequence ID:NM_001130158
NM_001161819
NM_012223
Entrez Gene ID:4430
Ensembl ID:ENSG00000128641

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, stem cell, stomach, synovium, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q12-q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 192110114 - 192290110

 Exon Info From UCSC:
NM_001130158
NM_001161819
NM_012223

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6162505Full LengthBC053558myosin IB
3934873IncompleteBC021665myosin IB

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036355  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001130158 NP_001123630 O43795  
NM_001161819 NP_001155291    
NM_012223 NP_036355   Myosin_head
IQ
Myosin_TH1

Related Sequences

 
mRNAGenPeptSwissProt
L29138 AAA20901 Q14777
BC021665 AAH21665 Q05CR5
BC053558 AAH53558 O43795
EU832201 ACE86771  
EU832107 ACE87457  
AB290176 BAG06730 B0I1S9
AK074978 BAG52044 B3KQI2
AJ001381 CAA04712 O43795
AJ001382 CAA04713 O43795

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MYO1B NP_001123630 M.musculus Myo1b 17912 Gene Info NP_034993 98
R.norvegicus Myo1b 117057   NP_446438 97
A.gambiae AgaP_AGAP004403 1274548   XP_313688 40
D.melanogaster Myo95E 2768680   NP_001027208 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)