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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SUPT4H1, suppressor of Ty 4 homolog 1 (S. cerevisiae)
Sequence ID:NM_003168
NR_073470
Entrez Gene ID:6827
Ensembl ID:ENSG00000213246

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 56422554 - 56429570

NM_003168 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1111465642253856423673
114712005642454856424601
120112565642488956424944
125713635642876256428868
136414995642942756429562

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3636217Full LengthBC002802suppressor of Ty 4 homolog 1 (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003159  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003168 NP_003159 P63272 Spt4

Related Sequences

 
mRNAGenPeptSwissProt
U43923 AAB07814 P63272
U38818 AAB18674 P63272
U38817 AAB18675 P63272
BC002802 AAH02802 P63272
EU446710 ABZ92239  
AK129758 BAC85230 P63272
AK311986 BAG34925 P63272
CR407663 CAG28591 P63272

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUPT4H1 NP_003159 M.musculus Supt4h1 20922 Gene Info NP_033322 100
R.norvegicus Supt4h1 287608   NP_001099298 100
A.gambiae AgaP_AGAP005428 1276125   XP_315434 66
D.melanogaster spt4 36387   NP_610802 63
C.elegans spt-4 175172   NP_497135 58
N.crassa NCU03838 3876744   XP_960597 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)