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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMPRSS2, Transmembrane protease, serine 2
Sequence ID:NM_001135099
NM_005656
Entrez Gene ID:7113
Ensembl ID:ENSG00000184012

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:21q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:21: 42839660 - 42870060

 Exon Info From UCSC:
NM_001135099
NM_005656

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6199625Full LengthBC051839transmembrane protease, serine 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005647  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135099 NP_001128571    
NM_005656 NP_005647 O15393 Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
U75329 AAC51784 O15393
AF123453 AAD37117 O15393
BC051839 AAH51839 O15393
AF270487 AAK29280 O15393
AF329454 AAK53559 Q96T73
AF318374 AAL55881 Q8WYS7
HQ448630 ADQ33108  
AK222784 BAD96504 O15393
AK291813 BAF84502 A8K6Z8
AK313338 BAG36142 O15393
AK296860 BAH12445 B7Z459

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMPRSS2 NP_001128571 M.musculus Tmprss2 50528 Gene Info NP_056590 79
R.norvegicus Tmprss2 156435   NP_569108 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)