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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SBSPON, somatomedin B and thrombospondin, type 1 domain containing
Sequence ID:NM_153225
Entrez Gene ID:157869
Ensembl ID:ENSG00000164764

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 73978153 - 73978625

NM_153225 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
829227397677873979692
292330997398203973982215
310031907398401473984104
319133857399325373993447
338638047400508874005506

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5169941Full LengthBC042877chromosome 8 open reading frame 84

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153225 NP_694957 Q8IVN8  

Related Sequences

 
mRNAGenPeptSwissProt
BC042877 AAH42877 Q8IVN8
AY040546 AAK83466 Q8IVN8
AK292970 BAF85659 Q8IVN8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C8orf84 NP_694957 M.musculus Gm106 226866 Gene Info NP_001028460 89
R.norvegicus Rpesp 297757   XP_216317 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)