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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMEM18, Transmembrane protein 18
Sequence ID:NM_152834
Entrez Gene ID:129787
Ensembl ID:ENSG00000151353

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 669210 - 676662

NM_152834 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
171717667974669674
17181811669756669849
18121866672807672861
18671987675509675629
19882138677288677438

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4686355Full LengthBC016010transmembrane protein 18
5109444Full LengthBC032379transmembrane protein 18

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152834 NP_690047 Q96B42  

Related Sequences

 
mRNAGenPeptSwissProt
BC016010 AAH16010 Q96B42
BC032379 AAH32379 Q96B42
HQ447216 ADQ31703  
AL137269 CAB70668 Q96B42

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMEM18 NP_690047 M.musculus Tmem18 211986 Gene Info NP_742046 78
R.norvegicus Tmem18 362722   NP_001007749 78
A.gambiae AgaP_AGAP005132 1274810   XP_314015 48
D.melanogaster CG30051 246418   NP_725169 46
A.thaliana AT1G34350 840336   NP_564444 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)