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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NLGN3, neuroligin 3
Sequence ID:NM_001166660
NM_018977
NM_181303
RefSeqGene ID:NG_015874
Entrez Gene ID:54413
Ensembl ID:ENSG00000196338

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 70373305 - 70391049

 Exon Info From UCSC:
NM_001166660
NM_018977
NM_181303

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5258980Full LengthBC051715neuroligin 3
5263628IncompleteBC028738neuroligin 3

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166660 NP_001160132    
NM_018977 NP_061850    
NM_181303 NP_851820 Q9NZ94  

Related Sequences

 
mRNAGenPeptSwissProt
AF217411 AAF71230 Q9NZ94
AF217412 AAF71231 Q9NZ94
BC028738 AAH28738 Q4G160
BC051715 AAH51715 Q9NZ94
GQ489207 ADB12634 Q9NZ94
JF432393 ADZ15610  
AB040913 BAA96004 Q9NZ94
AK074814 BAC11226 Q9NZ94
AK314699 BAG37248 Q9NZ94
AK296217 BAH12284 B7Z3P8
AK299567 BAH13067 B7Z5Y1
AK299669 BAH13096 B7Z610
BX641059 CAE46030 Q6MZK0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NLGN3 NP_851820 M.musculus Nlgn3 245537 Gene Info NP_766520 99
R.norvegicus Nlgn3 171297   NP_599163 99
A.gambiae AgaP_AGAP003568 3290865   XP_562412 39
D.melanogaster CG34127 40912   NP_001036685 38
N.crassa NCU00761 3880298   XP_964158 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)