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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPS19, ribosomal protein S19
Sequence ID:NM_001022
RefSeqGene ID:NG_007080
Entrez Gene ID:6223
Ensembl ID:ENSG00000105372

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
DIAMOND-BLACKFAN ANEMIA 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 42364324 - 42375445

NM_001022 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13724236398742364358
3734434236484442364914
4445444236518042365280
5457284237310042373283
7297834237376842373822
7848474237541842375481

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3354280Full LengthBC007615ribosomal protein S19
3504083Full LengthBC000023ribosomal protein S19
4867036Full LengthBC018616ribosomal protein S19
3681722IncompleteBC017386ribosomal protein S19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001013  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001022 NP_001013 P39019 Ribosomal_S19e

Related Sequences

 
mRNAGenPeptSwissProt
M81757 AAA89070 P39019
BC000023 AAH00023 P39019
BC007615 AAH07615 P39019
BC017386 AAH17386 Q8WVX7
BC018616 AAH18616 P39019
DQ891823 ABM82749  
EU176636 ABW03437  
AK311786 BAG34729 B0ZBD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPS19 NP_001013 M.musculus Rps19-ps6 100503302   XP_003085629 99
M.musculus Rps19 20085 Gene Info NP_075622 99
R.norvegicus Rps19 29287   NP_001032423 99
A.thaliana AT5G61170 836238   NP_200925 58
D.melanogaster RpS19b 42830   NP_651195 58
A.thaliana AT5G15520 831405   NP_197056 56
A.thaliana AT3G02080 821120   NP_186857 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)