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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RPL34, ribosomal protein L34
Sequence ID:NM_000995
NM_033625
Entrez Gene ID:6164
Ensembl ID:ENSG00000109475

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4q25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 109543159 - 109546412

 Exon Info From UCSC:
NM_000995
NM_033625

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3355603Full LengthBC001773ribosomal protein L34
4390762Full LengthBC106009ribosomal protein L34
6724916Full LengthBC070208ribosomal protein L34

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_296374  NP_000986  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000995 NP_000986 P49207 Ribosomal_L34e
NM_033625 NP_296374 P49207 Ribosomal_L34e

Related Sequences

 
mRNAGenPeptSwissProt
L38941 AAC41916 P49207
BC001773 AAH01773 P49207
BC070208 AAH70208 P49207
BC106009 AAI06010 P49207
AY762981 AAV88043 Q5MK14
DQ892502 ABM83428  
DQ895715 ABM86641  
D28420 BAA05786  
CR542232 CAG47028 P49207
CR542242 CAG47038 P49207

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPL34 NP_000986 M.musculus Gm6404 623174 Gene Info XP_892698 94
N.crassa NCU07857 3879257   XP_963118 63
D.melanogaster RpL34b 41120   NP_649887 60
D.melanogaster RpL34a 43169   NP_001189295 60
S.pombe rpl3401 2541989   NP_594438 60
A.gambiae AgaP_AGAP009324 1271236   XP_309993 59
S.pombe rpl3402 2538815   NP_588143 58
C.elegans rpl-34 178173   NP_502330 54
S.cerevisiae RPL34A 856784   NP_010977 54
S.cerevisiae RPL34B 854759   NP_012212 54
A.thaliana AT1G26880 838331   NP_174010 52
A.thaliana RPL34 843298   NP_177120 51
A.thaliana AT3G28900 822524   NP_189532 50
P.falciparum PF07_0043 2655091   XP_001349019 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)