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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MDGA1, MAM domain containing glycosylphosphatidylinositol anchor 1
Sequence ID:NM_153487
Entrez Gene ID:266727
Ensembl ID:ENSG00000112139

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 37600283 - 37665766

 Exon Info From UCSC:
NM_153487

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062200Full LengthBC156659MAM domain containing glycosylphosphatidylinositol anchor 1
100016046BC152817MAM domain containing glycosylphosphatidylinositol anchor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705691  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153487 NP_705691 Q8NFP4 ig
MAM

Related Sequences

 
mRNAGenPeptSwissProt
BC152817 AAI52818  
BC156659 AAI56660  
AF478693 AAM77220 Q8NFP4
AK090677 BAC03502 Q8NFP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MDGA1 NP_705691 M.musculus Mdga1 74762 Gene Info NP_001074629 97
R.norvegicus Mdga1 309659   NP_001101088 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)