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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PEX2, peroxisomal biogenesis factor 2
Sequence ID:NM_000318
NM_001079867
NM_001172086
NM_001172087
RefSeqGene ID:NG_008371
Entrez Gene ID:5828
Ensembl ID:ENSG00000164751

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PEROXISOME BIOGENESIS DISORDER 1A (ZELLWEGER)PEX1
PEX10
PEX12
PEX13
PEX14
PEX19
PEX26
PEX26
PEX3
PEX3
PEX5
PEX6
PEROXISOME BIOGENESIS DISORDER 5A (ZELLWEGER) 
PEROXISOME BIOGENESIS DISORDER 5B 

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 77895496 - 77912333

 Exon Info From UCSC:
NM_000318
NM_001079867
NM_001172086
NM_001172087

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3347824Full LengthBC000661peroxisomal membrane protein 3, 35kDa
3934225Full LengthBC005375peroxisomal membrane protein 3, 35kDa
30399827Full LengthBC093043peroxisomal membrane protein 3, 35kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000309  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000318 NP_000309 P28328 zf-C3HC4
Pex2_Pex12
NM_001079867 NP_001073336    
NM_001172086 NP_001165557    
NM_001172087 NP_001165558    

Related Sequences

 
mRNAGenPeptSwissProt
M85038 AAA60141 P28328
M86852 AAC12785 P28328
BC000661 AAH00661 Q6GU86
BC005375 AAH05375 P28328
BC093043 AAH93043 P28328
EU446992 ABZ92521  
AK312997 BAG35833 B2R7I6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PEX2 NP_000309 M.musculus Pxmp3 19302 Gene Info NP_001156773 88
R.norvegicus Pex2 29534   NP_058930 88
A.gambiae AgaP_AGAP010836 1271126   XP_309872 34
D.melanogaster pex2 38941   NP_648210 33
N.crassa NCU02070 3880759   XP_964597 33
A.thaliana TED3 844320   NP_565222 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)