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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SPIB, Spi-B transcription factor (Spi-1/PU.1 related)
Sequence ID:NM_003121
NM_001243999
NM_001244000
NM_001243998
Entrez Gene ID:6689
Ensembl ID:ENSG00000142539

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19q13.3-q13.4Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:19: 50932351 - 50934570

Transcript StartTranscript EndChromosomal Start Chromosomal End
1485092219450922241
49765092320250923229
771495092572950925801
1503645092607950926293
3655155092686150927011
51610165093129450931794
101814715093179550932248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4309499Full LengthBC007921Spi-B transcription factor (Spi-1/PU.1 related)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003112  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243998 NP_001230927    
NM_001243999 NP_001230928    
NM_001244000 NP_001230929    
NM_003121 NP_003112 Q01892 Ets

Related Sequences

 
mRNAGenPeptSwissProt
BC007921 AAH07921 Q01892
EU446656 ABZ92185  
AK292644 BAF85333 Q01892
AK300639 BAG62328 B4DUG6
X66079 CAA46878 Q01892
X96998 CAA65726 Q01892

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SPIB NP_003112 M.musculus Spib 272382 Gene Info NP_063919 85
R.norvegicus Spib 499146   NP_001019457 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)