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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BRD7, bromodomain containing 7
Sequence ID:NM_001173984
NM_013263
RefSeqGene ID:NG_023418
Entrez Gene ID:29117
Ensembl ID:ENSG00000166164

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 50352940 - 50402737

 Exon Info From UCSC:
NM_001173984
NM_013263

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6149862Full LengthBC050728bromodomain containing 7
30719813Full LengthBC094706bromodomain containing 7
3503011IncompleteBC001611bromodomain containing 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037395  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173984 NP_001167455    
NM_013263 NP_037395 Q9NPI1 Bromodomain

Related Sequences

 
mRNAGenPeptSwissProt
AF213969 AAF19526 Q9NPI1
AF152604 AAF75126 Q9NPI1
BC001611 AAH01611 Q9NPI1
BC050728 AAH50728 Q9NPI1
BC094706 AAH94706 Q9NPI1
AK027308 BAB55031 Q9NPI1
AK074613 BAC11089 Q9NPI1
AJ271881 CAB72445 Q9NPI1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BRD7 NP_001167455 M.musculus Brd7 26992 Gene Info NP_036177 88
A.gambiae AgaP_AGAP009307 3291948   XP_553263 39
D.melanogaster CG7154 34062   NP_609148 36
C.elegans tag-298 172461   NP_492041 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)