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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RPLP2, ribosomal protein, large, P2
Sequence ID:NM_001004
Entrez Gene ID:6181
Ensembl ID:ENSG00000177600

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11p15.5Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 809967 - 812871

NM_001004 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1104809935810038
105228810233810356
229277811596811644
278376812534812632
377493812759812875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3049240Full LengthBC007573ribosomal protein, large, P2
4052568Full LengthBC005354ribosomal protein, large, P2
4274135Full LengthBC005920ribosomal protein, large, P2
4685028Full LengthBC062314ribosomal protein, large, P2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000995  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004 NP_000995 P05387 Ribosomal_60s

Related Sequences

 
mRNAGenPeptSwissProt
M17887 AAA36472 P05387
BC005354 AAH05354 P05387
BC005920 AAH05920 P05387
BC007573 AAH07573 P05387
BC062314 AAH62314 P05387
D28411 BAA05777  
AK311954 BAG34894 P05387
CR542212 CAG47008 P05387
CR542248 CAG47044 P05387

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RPLP2 NP_000995 M.musculus Rplp2 67186 Gene Info NP_080296 99
R.norvegicus Rplp2 140662   NP_001025192 97
R.norvegicus LOC498555 498555   XP_573831 97
A.gambiae AgaP_AGAP003025 1272927   XP_311852 66
N.crassa NCU00979 3881308   XP_965172 66
S.pombe rpp201 2541296   NP_596513 63
D.melanogaster RpLP2 36855   NP_995857 61
C.elegans C37A2.7 172401   NP_491944 60
S.cerevisiae RPP2B 851990   NP_010670 60
S.pombe rpp203 2543051   NP_594358 60
S.pombe rpp202 2540587   NP_595873 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)