Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACNA1E, calcium channel, voltage-dependent, R type, alpha 1E subunit
Sequence ID:NM_000721
NM_001205293
NM_001205294
Entrez Gene ID:777
Ensembl ID:ENSG00000198216

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 181684505 - 181774060


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069070Full LengthBC172376calcium channel, voltage-dependent, R type, alpha 1E subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000712  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000721 NP_000712   Ion_trans
NM_001205293 NP_001192222 Q15878  
NM_001205294 NP_001192223    

Related Sequences

 
mRNAGenPeptSwissProt
L29384 AAA59204 Q15878
L29385 AAA59205 Q15878
L27745 AAA72125 Q15878
BC172376 AAI72376  
AB209499 BAD92736 Q59FG1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA1E NP_000712 M.musculus Cacna1e 12290 Gene Info NP_033912 97
R.norvegicus Cacna1e 54234   NP_062167 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)